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Finding Genius Podcast

The Latest in Genetics Epidemiology and Next Generation Genome Sequencing with Sarah Ennis

Finding Genius Podcast

Richard Jacobs

Medicine, Health & Fitness

4.41K Ratings

🗓️ 29 April 2020

⏱️ 43 minutes

🧾️ Download transcript

Summary

Professor Sarah Ennis has been in the field of genetic epidemiology for over 20 years.

In this conversation, she explains

  • What a dry lab does specifically in terms of understanding disease through data analysis,
  • The types of information they can pass on to clinicians to help them treat patients, and 
  • What the future holds as far as the ability to offer molecular diagnoses. 

Sarah Ennis runs the Genomic Informatics group at the University of South Hampton, which is a dry lab specializing in next generation sequencing (NGS) data and clinical cohorts. She explains that genetics epidemiology in a dry lab setting means she and her colleagues use data analysis to offer information on disease.

Specifically, they look at the genome data of patients to understand how and why the DNA mutates and changes and how and why those changes cause sickness in some cases and none in other cases. 

She offers listeners more detail about the factors they analyze as they untangle what changes are important and how and why. Along the way she is able to explain the logistics of what scientists really mean whey they say they've sequenced a genome, including the focus on the positive strand of the 5 and 3 prime, and how recessive and dominant disease genes are understood in this context.

She then ties this information to next generation sequencing, how it offers a less expensive and more sweeping technique to produce the data.

Finally, she discusses her present work on analyzing data on inflammatory bowel disease for children and adults. Inflammatory bowel disease is very hard on children who depend on nutrition for growth.

Their analysis allows them to tell clinicians if it's caused by one gene in one patient and another gene in a second patient; therefore, the clinician can specialize the medicines accordingly.

For more, see the Genomic Informatics group page at the University of South Hampton: https://www.southampton.ac.uk/medicine/academic_units/academic_units/gegi.page

Transcript

Click on a timestamp to play from that location

0:00.0

Forget frequently asked questions.

0:02.0

Common sense, common knowledge, or Google.

0:05.0

How about advice from a real genius?

0:07.0

95% of people in any profession are good enough to be qualified and licensed.

0:11.0

5% go above and beyond. They become very good at what they do, but only 0.1% are real Jesus.

0:18.0

Richard Jacobs has made it his life's mission to find them for you. He hunts down and interviews geniuses in every field,

0:25.0

sleep science, cancer, stem cells, ketogenic diets, and more. Here come the geniuses.

0:30.3

This is the Finding Genius Podcast.

0:33.0

That is Richard Jacobs.

0:35.0

Hello, this is Richard Jacobs with the Finding Genius Podcast.

0:41.0

I have Sarah Ennis, she's a professor of genomics

0:44.6

at the University of Southampton.

0:46.9

She's worked in the field of genetic epidemiology

0:49.8

for over 20 years.

0:51.2

She runs the Human Genome Informatics Group. It's a dry laboratory which we'll get into very briefly

0:57.2

specializing in the analysis of what's called NGS data and clinical cohorts. So we'll talk about all that.

1:03.7

Sarah, thanks for coming.

1:05.4

No problem.

1:06.4

Yeah, I didn't know this until recently, but I've heard about dry labs versus wet labs.

1:11.0

Can you explain that to listen to us there?

1:12.3

What the differences?

1:13.1

Yeah, I think this goes to most of the time

...

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